R in Docker

使用docker 搭建R运行环境，并打通R与Java的通道

Short Description

r docker image from ubuntu:16.04 (r-base, r-base-dev, devtools, open-jdk8, rJava)

Full Description

Docker images for R, Shiny... from Ubuntu

• r-min
  • Ubuntu:16.04
  • r-base and r-base-dev
• r-basic
  • r-min
  • devtools (with dependencies = T)
  • (64 packages in site-library)
• r-java
  • r-basic
  • open jdk 8
  • rJava
• r-shiny

第一步：拉取镜像

docker pull jaehyeon/r-java

第二步：运行容器

docker run -d -p 81:81 -ti docker.io/jaehyeon/r-java:latest /bin/bash

第三步：进入R，安装rJava和Rserver

install.packages('rJava')

install.packages('Reserve')

第四步：配置环境变量

#add R env

R_HOME=/usr/lib/R
PATH=$PATH:$R_HOME/bin
LD_LIBRARY_PATH=/usr/local/lib/R/site-library/rJava/jri/

#add java

JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64
CLASSPATH=$JAVA_HOME/lib/
PATH=$PATH:$JAVA_HOME/bin:$R_HOME/bin
export  LD_LIBRARY_PATH R_HOME  JAVA_HOME CLASSPATH  PATH

 

参考网址：https://hub.docker.com/r/jaehyeon/r-java/